PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_024663-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 526aa    MW: 57620.4 Da    PI: 6.2077
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_024663-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.99.7e-19234274140
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkver 40 
                    ++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+ e 
  NNU_024663-RA 234 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApGCPVRKQKEI 274
                    58***************************99******9775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-25219314IPR003657WRKY domain
SuperFamilySSF1182902.22E-17227277IPR003657WRKY domain
PROSITE profilePS5081122.504229314IPR003657WRKY domain
SMARTSM007744.2E-28234313IPR003657WRKY domain
PfamPF031062.5E-22235312IPR003657WRKY domain
SuperFamilySSF1182907.45E-5285314IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MVMEERAMQI DLSLKLEGQD EGEKDEEKQH EISLDDKQGK LHHEDGIEEA EKREEDQDDA  60
SPENLLQGNN LKIEKLSVLQ MEMDRMKEEN KQLRKVVEQT MKDYYDLQMK LAVIQQNDTK  120
QDPQIFLSLR GGPKTIQASK QVPEIEKNNN NQGTQLTSEA DSGEEDGELG LTLSMGSHVQ  180
QRGRDESTEE RKSMEPINKL PRTTQLPGIT SYPPNPPNRK ARVSVRARCQ APTMNDGCQW  240
RKYGQKVAKG NPCPRAYYRC TVAPGCPVRK QKEIRTHKLS PVPSYHCSDQ VQRCLEDMSI  300
LITTYEGTHN HPLPVGATAM ASTTSTAATF MLLSGVNSGT PVVADGIISD AQTPISYRSP  360
HSISPPPHSS STLSNIINAS DHSKGIVLDL TNNSQQFSFA GSSHSQPQLV YPWMSSNSGH  420
HHHKAGSYGG LSISNELGSL RGVDKGNWKT EEEKSSLAEN VSSIASDPKF RVAVAAAITS  480
FMSKESPMAQ PNGSSLVLGD GEAAGSSSGS KWVAAEFLPA CGKPLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-18221316176WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245089.10.0PREDICTED: probable WRKY transcription factor 9 isoform X2
TrEMBLS5CKA91e-129S5CKA9_JATCU; Uncharacterized protein
STRINGVIT_12s0055g00340.t011e-128(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.16e-68WRKY DNA-binding protein 9